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Search for "cation binding" in Full Text gives 17 result(s) in Beilstein Journal of Organic Chemistry.

Switchable molecular tweezers: design and applications

  • Pablo Msellem,
  • Maksym Dekthiarenko,
  • Nihal Hadj Seyd and
  • Guillaume Vives

Beilstein J. Org. Chem. 2024, 20, 504–539, doi:10.3762/bjoc.20.45

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  • flourished since the early 2000s. It is worth mentioning, as stated by Leigh in a comprehensive review [15], that a pioneering example of a molecular machine was the photoswitchable molecular tweezers developed by Shinkai [16] in 1981 for photocontrolled cation binding. This novel class of tweezers
  • podand unit adopts a cyclic conformation wrapping around the cation and brings the arms close to each other. The selectivity of the cation binding can be modulated by changing the chain length similarly to a crown ether (Figure 17). The cation can be removed by the addition of a better ligand such as a
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Published 01 Mar 2024

Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type lectin

  • Jon Lundstrøm,
  • Emilie Gillon,
  • Valérie Chazalet,
  • Nicole Kerekes,
  • Antonio Di Maio,
  • Ten Feizi,
  • Yan Liu,
  • Annabelle Varrot and
  • Daniel Bojar

Beilstein J. Org. Chem. 2024, 20, 306–320, doi:10.3762/bjoc.20.31

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  • (Val6 to Asp132) could be modelled, and unambiguous electron density permitted us to locate and model four cation binding sites (three in each structure) and one sugar binding site (Figure 4a,b and Figure S4, Supporting Information File 2). The complexed structures allowed us to shed light on the
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Published 19 Feb 2024

Tying a knot between crown ethers and porphyrins

  • Maksym Matviyishyn and
  • Bartosz Szyszko

Beilstein J. Org. Chem. 2023, 19, 1630–1650, doi:10.3762/bjoc.19.120

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  • cationic entity in the crown ether-like cavity and an anion in the region close to the metalloporphyrin core (Figure 7). The studies showed that the cation binding in the hovering crown pockets of 9-Zn and 9-Cu included, but was not limited to, alkali metal cations, transition metal cations, and
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Perspective
Published 27 Oct 2023

Constrained thermoresponsive polymers – new insights into fundamentals and applications

  • Patricia Flemming,
  • Alexander S. Münch,
  • Andreas Fery and
  • Petra Uhlmann

Beilstein J. Org. Chem. 2021, 17, 2123–2163, doi:10.3762/bjoc.17.138

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Published 20 Aug 2021

Anion-driven encapsulation of cationic guests inside pyridine[4]arene dimers

  • Anniina Kiesilä,
  • Jani O. Moilanen,
  • Anneli Kruve,
  • Christoph A. Schalley,
  • Perdita Barran and
  • Elina Kalenius

Beilstein J. Org. Chem. 2019, 15, 2486–2492, doi:10.3762/bjoc.15.241

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  • in pyridine[4]arene is an anion-driven process. Keywords: cation binding; DFT calculations; ion mobility mass spectrometry; macrocycles; pyridinearenes; resorcinarenes; Introduction Resorcinarenes and their derivatives are known for the molecular recognition properties of their self-assembled
  • dimeric resorcin[4]arene and pyridine[4]arene capsules, we highlight here unique host–guest properties of pyridinearene capsules. In marked contrast to the corresponding resorcin[4]arene capsules, cation binding is clearly feasible, when anions bind in an exo-site and support cation encapsulation by
  • , cation binding to pyridinearene is clearly not as strong as with resorcin[4]arene, which is known for its excellent cation receptor properties. A comparison of these two macrocyclic hosts reveals significant differences in their binding properties. Pyridine[4]arene appears to have a better affinity
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Published 21 Oct 2019

Dynamic light scattering studies of the effects of salts on the diffusivity of cationic and anionic cavitands

  • Anthony Wishard and
  • Bruce C. Gibb

Beilstein J. Org. Chem. 2018, 14, 2212–2219, doi:10.3762/bjoc.14.195

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  • . More specifically, both octacarboxylate 1 and positand 2 have a non-polar cavity that can function as an anion (but not to our knowledge a cation) binding site. Anion binding to the cavity of positively charged 2 is stronger than to negatively charged 1 [13][14], but nevertheless anion binding to 1 can
  • be as strong as 4.60 kcal mol−1. Host 2 has a second anion binding site in the form of the crown of trimethylammoniums “under” the primary bowl [14], and correspondingly the four chelating carboxylates of the crown of 1 may be a reasonable cation binding site. Furthermore, in addition to these
  • , Figure S3), which revealed only trace amounts of host aggregation (≈5%). Furthermore, even at 100 mM salt concentration, 1H NMR spectroscopy failed to show any significant association of Cs+ to the crown of four carboxylates. Thus, although this crown is the most obvious potential cation binding site, we
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Published 23 Aug 2018

Sulfation and amidinohydrolysis in the biosynthesis of giant linear polyenes

  • Hui Hong,
  • Markiyan Samborskyy,
  • Katsiaryna Usachova,
  • Katharina Schnatz and
  • Peter F. Leadlay

Beilstein J. Org. Chem. 2017, 13, 2408–2415, doi:10.3762/bjoc.13.238

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  • that it contains the sequence motifs xGGDH, DAHxD, and SxDxDxxDPxxxP (where x = any amino acid), which are conserved in this enzyme superfamily and are implicated in cation binding and catalysis [19][20][21][22]. Our finding that amidinohydrolase encoded by the medi4948 gene acts on both
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Published 13 Nov 2017

p-tert-Butylthiacalix[4]arenes functionalized by N-(4’-nitrophenyl)acetamide and N,N-diethylacetamide fragments: synthesis and binding of anionic guests

  • Alena A. Vavilova and
  • Ivan I. Stoikov

Beilstein J. Org. Chem. 2017, 13, 1940–1949, doi:10.3762/bjoc.13.188

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  • (phenolic fragments) groups can participate in anion binding. To determine the possibility of the tetrabutylammonium cation binding by the synthesized thiacalix[4]arenes, solutions of the compounds 3, 5 and 6 in the presence of a 10-fold excess of n-Bu4NX (X = F−, Cl−, Br−, I−, CH3CO2−, H2PO4−, NO3−) were
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Published 13 Sep 2017

Synthesis and metal binding properties of N-alkylcarboxyspiropyrans

  • Alexis Perry and
  • Christina J. Kousseff

Beilstein J. Org. Chem. 2017, 13, 1542–1550, doi:10.3762/bjoc.13.154

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  • spiropyran-modified agarose gel [14][15] and the creation of light-responsive nanopores through modification of natural channel proteins [16]. Furthermore, addition of an N-alkylcarboxylate moiety is a common tactic used to enhance water solubility of spiropyran derivatives [6]. Spiropyran–metal cation
  • binding occurs as a result of stabilisation of the zwitterionic merocyanine isomer via phenoxide–metal complexation [17] (Figure 1). Commonly, merocyanines undergo photoreversion to their corresponding spiropyran under visible light irradiation and metal complexation is usually achieved either in darkness
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Published 04 Aug 2017

Pd- and Cu-catalyzed approaches in the syntheses of new cholane aminoanthraquinone pincer-like ligands

  • Nikolay V. Lukashev,
  • Gennadii A. Grabovyi,
  • Dmitry A. Erzunov,
  • Alexey V. Kazantsev,
  • Gennadij V. Latyshev,
  • Alexei D. Averin and
  • Irina P. Beletskaya.

Beilstein J. Org. Chem. 2017, 13, 564–570, doi:10.3762/bjoc.13.55

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  • arylaminocholanes and cholane-diaminoanthraquinone derivatives by Pd- and Cu-catalyzed amination. Such compounds not only have cation binding properties, but also might be easily introduced in lipid membranes to form ion channels. Appropriate close location of lipophilic steroid fragments in bis(cholanediamino
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Published 20 Mar 2017

From steroids to aqueous supramolecular chemistry: an autobiographical career review

  • Bruce C. Gibb

Beilstein J. Org. Chem. 2016, 12, 684–701, doi:10.3762/bjoc.12.69

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Published 12 Apr 2016

Direct and indirect single electron transfer (SET)-photochemical approaches for the preparation of novel phthalimide and naphthalimide-based lariat-type crown ethers

  • Dae Won Cho,
  • Patrick S. Mariano and
  • Ung Chan Yoon

Beilstein J. Org. Chem. 2014, 10, 514–527, doi:10.3762/bjoc.10.47

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  • these compounds are crown ethers, whose preparation, and metal and ammonium cation-binding properties were explored thoroughly by Petersen and Lehn [68][69]. Early pioneering efforts by Gokel and coworkers [70][71][72][73] in this area have shown that novel, lariat-type crown ethers display unique
  • lariat-type crown ethers that could have potentially interesting metal cation binding properties. As can be seen by inspection of the synthetic sequence shown in Scheme 14, the preparation of lariat-type crown ethers 72–74 by employing this strategy began with the synthesis of the α-silyl ether
  • substances that signal guest-binding by interrupting the SET-quenching of the excited states of the fluorophore moieties that are appended to the host (Scheme 15). We expected that metal cation binding to 72–74 would be assisted by the oxygen, nitrogen, and sulfur donors within the pendant side chain. As a
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Published 27 Feb 2014

Intermediates in monensin biosynthesis: A late step in biosynthesis of the polyether ionophore monensin is crucial for the integrity of cation binding

  • Wolfgang Hüttel,
  • Jonathan B. Spencer and
  • Peter F. Leadlay

Beilstein J. Org. Chem. 2014, 10, 361–368, doi:10.3762/bjoc.10.34

Graphical Abstract
  • surrounding the sodium ion. It has previously been shown that chemical modifications at the C-25 and/or C-26 hydroxy groups of monensin A lower both cation binding and antibiotic activity [35][36], presumably by the same mechanism. However, not all derivatives at C-26 behave in the same way: both natural and
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Published 10 Feb 2014

Similarity analysis, synthesis, and bioassay of antibacterial cyclic peptidomimetics

  • Workalemahu M. Berhanu,
  • Mohamed A. Ibrahim,
  • Girinath G. Pillai,
  • Alexander A. Oliferenko,
  • Levan Khelashvili,
  • Farukh Jabeen,
  • Bushra Mirza,
  • Farzana Latif Ansari,
  • Ihsan ul-Haq,
  • Said A. El-Feky and
  • Alan R. Katritzky

Beilstein J. Org. Chem. 2012, 8, 1146–1160, doi:10.3762/bjoc.8.128

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  • direction of the two chains attached to the cysteine residue. For example, one of the early cysteine-containing macrocycles was designed to mimic the cation binding ability of valinomycin [24]. Numerous literature approaches to the synthesis of 17-, 18- and 24-membered rings utilize: (i) acyl chlorides, (ii
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Published 24 Jul 2012

Fifty years of oxacalix[3]arenes: A review

  • Kevin Cottet,
  • Paula M. Marcos and
  • Peter J. Cragg

Beilstein J. Org. Chem. 2012, 8, 201–226, doi:10.3762/bjoc.8.22

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Published 07 Feb 2012
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  • conformer, namely uddudd. One can expect a significant effect of the nature of the recognition elements on conformational energies. Many recognition elements that vary in shape, functionality, charge, and chirality have been reported. We picked pyrazole-derived hosts 4 (used for cation binding) [17] and
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Published 02 Jan 2012

Molecular recognition of organic ammonium ions in solution using synthetic receptors

  • Andreas Späth and
  • Burkhard König

Beilstein J. Org. Chem. 2010, 6, No. 32, doi:10.3762/bjoc.6.32

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  • of the macrocyclic ring may have, compared to the related parent crown ether, enhanced cation-binding. Crown ethers with linear or branched heteroatom-containing podand arms – depending on the connection point either N-pivot or C-pivot lariat ethers – exhibit increased guest specificity [106][114
  • selectivity in cation binding. The cavities are more rigid and unable to adapt to bind cations that are too small or too large for the cavity. The large body of published work on crown ether synthesis [119] and crown ether ammonium ion binding [120] cannot be covered comprehensively in this review, and
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Published 06 Apr 2010
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